Type

Text

Type

Dissertation

Advisor

Dykhuizen, Daniel E | Eanes, Walter | TRUE, John | Tonge, Peter.

Date

2015-05-01

Keywords

Biology | Antibiotic Resistance, mutation, streptomycin

Department

Department of Ecology and Evolution.

Language

en_US

Source

This work is sponsored by the Stony Brook University Graduate School in compliance with the requirements for completion of degree.

Identifier

http://hdl.handle.net/11401/77392

Publisher

The Graduate School, Stony Brook University: Stony Brook, NY.

Format

application/pdf

Abstract

Understanding how bacterial populations adapt in antibiotic environments has become important, given rising frequencies of antibiotic resistance. In this series of experiments, Escherichia coli are used to understand the mechanisms, timing, and selective forces that dictate how the populations adapt when exposed to the antibiotic streptomycin. We begin with a study of how antibiotic sensitive populations respond to antibiotics in an environment where the concentration of antibiotic grows from zero to above that which would normally kill E. coli cells. This was investigated via a novel system using continuous culture techniques. The results indicate that mutations giving resistance to streptomycin are present at low frequencies and immediately sweep to fixation once a threshold concentration of streptomycin is reached. However, resistance mutations of this kind are known to often have fitness costs. The compensatory mutation model holds that mutations that directly mitigate these losses in fitness will come into these populations quickly, raising mean fitness and allowing the resistant strains to successfully compete with their sensitive ancestors. In our experiments, no such direct compensation was found, even when investigated across numerous environments, growth conditions, and timescales. Rather, in all experiments, what was observed was an increase in fitness associated with adaptation to specific environmental conditions, just as would be expected in any experimental evolution experiment using antibiotic sensitive E. coli under similar conditions. This implies that after a population gains resistance to an antibiotic, there are little to no lasting negative effects for the population overall. | 136 pages

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